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Spot the Difference: Model Diffing with the New Interpretability Toolkit

Mechanistic interpretability

When a model is fine-tuned, updated, or trained into an agent, what actually changed inside? This project develops and compares model-diffing methods across the rapidly evolving interpretability toolkit — crosscoders, logit diffing, and newly released instruments like Anthropic's Jacobian lens — with mentees free to pick the method–application pairing they find most compelling.

About the project

Model diffing — characterizing what changed between two models — is becoming a central interpretability primitive: it underpins auditing fine-tunes, verifying that safety-relevant features survive model updates, and detecting drift in agentic systems whose behavior-level evals miss silently held state. But the toolkit is in flux. Crosscoders learn shared feature dictionaries across models; our prior SPAR rounds showed structural priors improve their feature matching ~30% NDCG@64 and produced a documented recipe for stable training. Meanwhile, cheaper instruments have just arrived: Anthropic's Jacobian lens (July 2026) transports any decoder's activations into vocabulary space, giving a model-agnostic shared coordinate system; logit-diffing methods identify domain-specific changes directly from output distributions; natural-language autoencoders offer another new lens. No one has systematically compared what these methods each see — and miss — on the same model pairs.

This project is deliberately open in structure: mentees choose a method (or comparison of methods) and an application, and own that slice. Example directions, not an exhaustive list: (1) benchmark learned diffing (crosscoders) against cheap shared-coordinate baselines (J-lens vocabulary space) on the same base-vs-fine-tuned pairs — when is the expensive method worth it? (2) apply diffing to detect what a targeted fine-tune changed, including changes invisible to behavioral evaluation (3) extend diffing to agentic settings — does agent training or long-horizon deployment shift internal representations in ways transcripts don't show? A returning senior mentee continues the crosscoder workstream; new mentees are not expected to build on it unless they choose to. Working pipelines, compute, and a stable-training recipe are inherited.

Target: workshop/main conferenc paper or preprint; methods and comparisons released open-source demo/webs.

Theory of change

Every safety-relevant question of the form "did this training change what we think it changed — and nothing else?" reduces to model diffing. As fine-tuning, distillation, and agentic post-training proliferate, cheap and reliable diffing becomes audit infrastructure: it lets providers and researchers verify updates, catch unintended trait transmission, and monitor agents for internal drift that behavior-only evals miss. Honestly comparing new instruments against learned methods tells the field which tools to trust for which job.

Your role

Each mentee owns one workstream end-to-end (experiments, figures, corresponding paper section) with a brief written weekly update. I set direction, review results in detail, and handle integration and framing. Primary workstream ≈80% of time, optional secondary support role ≤20%. High autonomy within a workstream, and scope changes agreed in meetings.

Prerequisites

  • Highly proficient in Python and PyTorch.
  • Comfortable with HuggingFace Transformers and running GPU jobs independently (Colab/RunPod).
  • Curiosity about evaluating new methods critically matters more than prior interpretability experience — SAE/crosscoder/TransformerLens familiarity is a plus, not required.
  • Comfort with linear algebra (subspaces, norms, rank) and geometry (mainfold, projection) knowledge needed for the workstream.

Location preference

No geographic restriction; mentees must be able to attend one of two weekly meeting slots anchored to Central European time (historically Saturday ~13:00 UTC and Wednesday ~14:00 UTC)

Application question(s)

  1. You have a base model and its fine-tuned variant, and unlimited queries to both but a small compute budget. Sketch two different ways to characterize what fine-tuning changed, and name one kind of change each method would miss. (300 words)
  2. An agent's transcripts look unchanged after further training, but you suspect its internal state has shifted. Propose one measurement that could detect this. (150 words)
  3. Link to a repository or technical writing sample.

About the mentor

Yuxiao Li

Yuxiao Li

Independent

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Yuxiao is an independent researcher in mechanistic interpretability. Before she was a postdoc at the Basque Center for Applied Mathematics (BCAM) and an AI Safety researcher at the Beneficial AI Foundation (BAIF). She was also a SERI MATS scholar in 2022 and a MATS scholar in 2023 both Summer and Winter tracks. Her research interests include information theory, probabilistic frameworks, and their applications for building more theoretically sound and trustworthy AI systems. She has a background in statistical inference, machine learning, and deep generative models. She completed her PhD in Electronic Engineering at Tsinghua University and has mentored research teams with SPAR and Algoverse.

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